Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NKX6-1P78426 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.71□□□□□ -0.22
NKX6-1P78426 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.71□□□□□ -0.22
NKX6-1P78426 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.71□□□□□ -0.22
NKX6-1P78426 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NKX6-1P78426 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
NKX6-1P78426 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NKX6-1P78426 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NKX6-1P78426 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX6-1P78426 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX6-1P78426 AC069224.1-201ENST00000566372 1715 ntBASIC13.7□□□□□ -0.22
NKX6-1P78426 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX6-1P78426 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NKX6-1P78426 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX6-1P78426 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX6-1P78426 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NKX6-1P78426 WFDC1-204ENST00000613603 549 ntBASIC13.7□□□□□ -0.22
NKX6-1P78426 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX6-1P78426 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX6-1P78426 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NKX6-1P78426 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX6-1P78426 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-1P78426 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NKX6-1P78426 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-1P78426 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-1P78426 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC136604.1-201ENST00000418535 575 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX6-1P78426 BNIP3P42-201ENST00000454982 569 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX6-1P78426 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 TIMM17BP1-201ENST00000545713 516 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 SNX29P1-201ENST00000548357 1007 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC092337.1-201ENST00000568699 1129 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 MIR4538-201ENST00000581377 78 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AC008735.3-201ENST00000596646 500 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms