Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
IRX4P78413 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX4P78413 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IRX4P78413 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 AC114501.2-201ENST00000439631 535 ntBASIC16.16■□□□□ 0.18
IRX4P78413 MYCLP2-201ENST00000449268 967 ntBASIC16.16■□□□□ 0.18
IRX4P78413 AC055876.2-201ENST00000531834 546 ntBASIC16.16■□□□□ 0.18
IRX4P78413 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 AC092552.1-201ENST00000547243 906 ntBASIC16.16■□□□□ 0.18
IRX4P78413 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
IRX4P78413 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.16■□□□□ 0.18
IRX4P78413 AL033527.4-201ENST00000641026 673 ntBASIC16.16■□□□□ 0.18
IRX4P78413 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX4P78413 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX4P78413 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX4P78413 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.15■□□□□ 0.18
IRX4P78413 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.15■□□□□ 0.18
IRX4P78413 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 SRD5A3P1-201ENST00000603021 949 ntBASIC16.15■□□□□ 0.18
IRX4P78413 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms