Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAE1P78406 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAE1P78406 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
RAE1P78406 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAE1P78406 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
RAE1P78406 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RAE1P78406 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.62□□□□□ -0.07
RAE1P78406 DRD5P1-201ENST00000456605 1438 ntBASIC14.62□□□□□ -0.07
RAE1P78406 AC092183.1-201ENST00000469884 875 ntBASIC14.62□□□□□ -0.07
RAE1P78406 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.62□□□□□ -0.07
RAE1P78406 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.62□□□□□ -0.07
RAE1P78406 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.62□□□□□ -0.07
RAE1P78406 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.62□□□□□ -0.07
RAE1P78406 RARRES2P5-201ENST00000564013 466 ntBASIC14.62□□□□□ -0.07
RAE1P78406 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.62□□□□□ -0.07
RAE1P78406 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.62□□□□□ -0.07
RAE1P78406 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.62□□□□□ -0.07
RAE1P78406 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.62□□□□□ -0.07
RAE1P78406 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RAE1P78406 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAE1P78406 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.62□□□□□ -0.07
RAE1P78406 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.61□□□□□ -0.07
RAE1P78406 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.61□□□□□ -0.07
RAE1P78406 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 FAM86LP-201ENST00000478302 853 ntBASIC14.61□□□□□ -0.07
RAE1P78406 AC093214.1-201ENST00000511688 1107 ntBASIC14.61□□□□□ -0.07
RAE1P78406 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.61□□□□□ -0.07
RAE1P78406 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.61□□□□□ -0.07
RAE1P78406 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 AL662799.1-202ENST00000614205 422 ntBASIC14.61□□□□□ -0.07
RAE1P78406 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.61□□□□□ -0.07
RAE1P78406 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 AL157414.3-201ENST00000624276 1954 ntBASIC14.61□□□□□ -0.07
RAE1P78406 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.61□□□□□ -0.07
RAE1P78406 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAE1P78406 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAE1P78406 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms