Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 DUX4L47-201ENST00000566374 394 ntBASIC18.07■□□□□ 0.48
CNTNAP1P78357 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 AC138466.3-201ENST00000619983 221 ntBASIC18.07■□□□□ 0.48
CNTNAP1P78357 AC068587.8-201ENST00000641239 219 ntBASIC18.07■□□□□ 0.48
CNTNAP1P78357 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP1P78357 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNTNAP1P78357 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC090857.1-201ENST00000527400 390 ntBASIC18.06■□□□□ 0.48
CNTNAP1P78357 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC138894.2-201ENST00000602838 371 ntBASIC18.06■□□□□ 0.48
CNTNAP1P78357 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC004899.1-201ENST00000424687 1714 ntBASIC18.06■□□□□ 0.48
CNTNAP1P78357 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC090340.1-201ENST00000620778 4980 ntBASIC18.06■□□□□ 0.48
CNTNAP1P78357 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP1P78357 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 AL512430.1-201ENST00000392575 860 ntBASIC18.05■□□□□ 0.48
CNTNAP1P78357 AL627231.1-201ENST00000394467 1125 ntBASIC18.05■□□□□ 0.48
CNTNAP1P78357 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 EIF5AP2-201ENST00000585668 1047 ntBASIC18.05■□□□□ 0.48
CNTNAP1P78357 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 AL603764.1-201ENST00000636452 321 ntBASIC18.05■□□□□ 0.48
CNTNAP1P78357 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP1P78357 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP1P78357 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms