Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 RARRES2P5-201ENST00000564013 466 ntBASIC13.51□□□□□ -0.25
HIST1H3AP68431 AC005498.2-205ENST00000593218 784 ntBASIC13.51□□□□□ -0.25
HIST1H3AP68431 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 AC106028.4-201ENST00000614509 607 ntBASIC13.51□□□□□ -0.25
HIST1H3AP68431 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 REXO1L2P-201ENST00000425429 2069 ntBASIC13.51□□□□□ -0.25
HIST1H3AP68431 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H3AP68431 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H3AP68431 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 CLK3P2-201ENST00000427566 1453 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 PMS2P2-201ENST00000425039 1128 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 BASP1P1-201ENST00000430708 665 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC004790.1-201ENST00000612686 536 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 REXO1L4P-201ENST00000605109 1937 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H3AP68431 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 AC013726.1-201ENST00000563747 2285 ntBASIC13.5□□□□□ -0.25
HIST1H3AP68431 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H3AP68431 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms