Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 ZBED1P1-201ENST00000502364 1930 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 FGD5P1-202ENST00000614866 2498 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 CYP4F24P-201ENST00000586049 1580 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 MRPL3P1-201ENST00000400109 1033 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 RPL5P21-201ENST00000404620 815 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.66□□□□□ -0.38
SPCS3P61009 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.66□□□□□ -0.38
SPCS3P61009 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 AC117489.1-201ENST00000625169 3217 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
SPCS3P61009 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 AC232323.1-201ENST00000540724 2099 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 REXO1L5P-201ENST00000622260 2098 ntBASIC12.66□□□□□ -0.38
SPCS3P61009 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SPCS3P61009 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPCS3P61009 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 HLA-H-201ENST00000383620 1096 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms