Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.81□□□□□ -0.04
VSX2P58304 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VSX2P58304 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VSX2P58304 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AL162726.2-201ENST00000438986 1017 ntBASIC14.81□□□□□ -0.04
VSX2P58304 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 AC026410.3-201ENST00000514280 936 ntBASIC14.81□□□□□ -0.04
VSX2P58304 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AC124283.3-201ENST00000570869 594 ntBASIC14.81□□□□□ -0.04
VSX2P58304 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AC107373.2-201ENST00000607735 490 ntBASIC14.81□□□□□ -0.04
VSX2P58304 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.81□□□□□ -0.04
VSX2P58304 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AC090616.6-203ENST00000579186 1945 ntBASIC14.81□□□□□ -0.04
VSX2P58304 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.81□□□□□ -0.04
VSX2P58304 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.81□□□□□ -0.04
VSX2P58304 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
VSX2P58304 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.81□□□□□ -0.04
VSX2P58304 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VSX2P58304 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VSX2P58304 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VSX2P58304 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.8□□□□□ -0.04
VSX2P58304 GIMAP3P-201ENST00000495150 836 ntBASIC14.8□□□□□ -0.04
VSX2P58304 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.8□□□□□ -0.04
VSX2P58304 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.8□□□□□ -0.04
VSX2P58304 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.8□□□□□ -0.04
VSX2P58304 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.8□□□□□ -0.04
VSX2P58304 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.8□□□□□ -0.04
VSX2P58304 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
VSX2P58304 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VSX2P58304 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 AP002414.2-201ENST00000591780 3365 ntBASIC14.8□□□□□ -0.04
VSX2P58304 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.8□□□□□ -0.04
VSX2P58304 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VSX2P58304 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VSX2P58304 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VSX2P58304 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.8□□□□□ -0.04
VSX2P58304 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms