Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 KLF2P2-201ENST00000416807 1039 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 TTTY23B-201ENST00000442790 549 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 AC012441.1-201ENST00000446669 685 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 USP32P1-208ENST00000506594 1164 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 AC068587.3-201ENST00000526613 355 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 TDH-203ENST00000531764 1110 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 AC015936.2-201ENST00000593177 259 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 KRT8P14-201ENST00000414254 1442 ntBASIC16.84■□□□□ 0.29
NCKAP1LP55160 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.84■□□□□ 0.29
NCKAP1LP55160 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1LP55160 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.83■□□□□ 0.29
NCKAP1LP55160 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.83■□□□□ 0.29
NCKAP1LP55160 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NCKAP1LP55160 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCKAP1LP55160 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NCKAP1LP55160 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AC114812.1-204ENST00000449669 728 ntBASIC16.83■□□□□ 0.28
NCKAP1LP55160 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 GIMAP3P-201ENST00000495150 836 ntBASIC16.83■□□□□ 0.28
NCKAP1LP55160 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AC008735.3-201ENST00000596646 500 ntBASIC16.83■□□□□ 0.28
NCKAP1LP55160 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCKAP1LP55160 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AL157414.3-201ENST00000624276 1954 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms