Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 AL359258.3-201ENST00000622910 2331 ntBASIC16.87■□□□□ 0.29
CLCN3P51790 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCN3P51790 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 AL157414.3-201ENST00000624276 1954 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 TPM3P8-201ENST00000330554 643 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLCN3P51790 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN3P51790 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN3P51790 HLA-K-203ENST00000430151 1046 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.86■□□□□ 0.29
CLCN3P51790 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.86■□□□□ 0.29
CLCN3P51790 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN3P51790 RN7SL560P-201ENST00000577943 264 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 RN7SL48P-201ENST00000579283 293 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN3P51790 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.86■□□□□ 0.29
CLCN3P51790 AC006453.4-201ENST00000636949 1252 ntBASIC16.86■□□□□ 0.29
CLCN3P51790 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLCN3P51790 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLCN3P51790 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN3P51790 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN3P51790 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 MST1L-201ENST00000442552 2185 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 AC020658.6-201ENST00000623564 1870 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 AC104457.1-201ENST00000401024 814 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 AC022494.1-201ENST00000466044 728 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 AC108725.1-201ENST00000495472 409 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms