Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.8□□□□□ -0.2
SRP9P49458 AC026979.3-201ENST00000607315 403 ntBASIC13.8□□□□□ -0.2
SRP9P49458 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 AL137784.3-201ENST00000623858 2288 ntBASIC13.8□□□□□ -0.2
SRP9P49458 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 KRT8P44-201ENST00000441609 1350 ntBASIC13.8□□□□□ -0.2
SRP9P49458 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.8□□□□□ -0.2
SRP9P49458 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SRP9P49458 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SRP9P49458 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SRP9P49458 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.79□□□□□ -0.2
SRP9P49458 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.79□□□□□ -0.2
SRP9P49458 AC026150.2-201ENST00000564693 1156 ntBASIC13.79□□□□□ -0.2
SRP9P49458 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.79□□□□□ -0.2
SRP9P49458 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.79□□□□□ -0.2
SRP9P49458 AC018529.1-201ENST00000613063 361 ntBASIC13.79□□□□□ -0.2
SRP9P49458 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SRP9P49458 AC011477.6-201ENST00000604980 1927 ntBASIC13.79□□□□□ -0.2
SRP9P49458 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SRP9P49458 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 KRT18P28-201ENST00000453838 1332 ntBASIC13.79□□□□□ -0.2
SRP9P49458 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.79□□□□□ -0.2
SRP9P49458 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRP9P49458 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SRP9P49458 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 CNN2P2-201ENST00000443536 909 ntBASIC13.78□□□□□ -0.2
SRP9P49458 CNN2P3-201ENST00000450201 906 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms