Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 HLA-V-201ENST00000429037 534 ntBASIC14.56□□□□□ -0.08
GABRA4P48169 AC026954.1-201ENST00000429771 1293 ntBASIC14.56□□□□□ -0.08
GABRA4P48169 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.56□□□□□ -0.08
GABRA4P48169 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.56□□□□□ -0.08
GABRA4P48169 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 KRT8P44-201ENST00000441609 1350 ntBASIC14.56□□□□□ -0.08
GABRA4P48169 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.55□□□□□ -0.08
GABRA4P48169 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 DUX4L47-201ENST00000566374 394 ntBASIC14.55□□□□□ -0.08
GABRA4P48169 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 AL360270.3-201ENST00000609118 1348 ntBASIC14.55□□□□□ -0.08
GABRA4P48169 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.55□□□□□ -0.08
GABRA4P48169 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 C18orf15-201ENST00000623680 2534 ntBASIC14.55□□□□□ -0.08
GABRA4P48169 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.55□□□□□ -0.08
GABRA4P48169 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRA4P48169 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRA4P48169 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
GABRA4P48169 REXO1L4P-201ENST00000605109 1937 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 AC008741.2-201ENST00000612792 3115 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms