Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HTTP42858 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HTTP42858 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HTTP42858 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.83■□□□□ 0.29
HTTP42858 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HTTP42858 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.83■□□□□ 0.29
HTTP42858 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
HTTP42858 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.83■□□□□ 0.29
HTTP42858 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.83■□□□□ 0.29
HTTP42858 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HTTP42858 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
HTTP42858 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
HTTP42858 AC100827.2-201ENST00000563214 1194 ntBASIC16.83■□□□□ 0.29
HTTP42858 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HTTP42858 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.83■□□□□ 0.29
HTTP42858 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.83■□□□□ 0.28
HTTP42858 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HTTP42858 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.83■□□□□ 0.28
HTTP42858 AL354861.1-201ENST00000445213 355 ntBASIC16.83■□□□□ 0.28
HTTP42858 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.83■□□□□ 0.28
HTTP42858 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.83■□□□□ 0.28
HTTP42858 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HTTP42858 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
HTTP42858 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
HTTP42858 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTTP42858 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
HTTP42858 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
HTTP42858 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
HTTP42858 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.83■□□□□ 0.28
HTTP42858 FTH1P22-201ENST00000456305 520 ntBASIC16.83■□□□□ 0.28
HTTP42858 AC009145.4-201ENST00000625119 1294 ntBASIC16.83■□□□□ 0.28
HTTP42858 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 AC084752.1-201ENST00000509766 622 ntBASIC16.82■□□□□ 0.28
HTTP42858 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.82■□□□□ 0.28
HTTP42858 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 AC009884.2-201ENST00000603110 324 ntBASIC16.82■□□□□ 0.28
HTTP42858 AL451007.2-201ENST00000632004 563 ntBASIC16.82■□□□□ 0.28
HTTP42858 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 HYMAI-201ENST00000635591 3347 ntBASIC16.82■□□□□ 0.28
HTTP42858 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.82■□□□□ 0.28
HTTP42858 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.82■□□□□ 0.28
HTTP42858 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HTTP42858 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.82■□□□□ 0.28
HTTP42858 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTTP42858 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 RN7SKP230-201ENST00000365642 335 ntBASIC16.81■□□□□ 0.28
HTTP42858 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.81■□□□□ 0.28
HTTP42858 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.81■□□□□ 0.28
HTTP42858 CICP13-201ENST00000422015 2789 ntBASIC16.81■□□□□ 0.28
HTTP42858 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.81■□□□□ 0.28
HTTP42858 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.81■□□□□ 0.28
HTTP42858 FRMPD2B-201ENST00000431305 1347 ntBASIC16.81■□□□□ 0.28
HTTP42858 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.81■□□□□ 0.28
HTTP42858 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HTTP42858 AC244197.1-201ENST00000456494 951 ntBASIC16.81■□□□□ 0.28
HTTP42858 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.81■□□□□ 0.28
HTTP42858 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.81■□□□□ 0.28
HTTP42858 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.81■□□□□ 0.28
HTTP42858 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HTTP42858 ENPP7P8-202ENST00000527856 1345 ntBASIC16.81■□□□□ 0.28
HTTP42858 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HTTP42858 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.81■□□□□ 0.28
HTTP42858 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.81■□□□□ 0.28
HTTP42858 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 CHCHD2P9-201ENST00000461726 456 ntBASIC16.81■□□□□ 0.28
HTTP42858 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms