Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHKAP35790 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.33■□□□□ 0.2
CHKAP35790 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
CHKAP35790 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.33■□□□□ 0.2
CHKAP35790 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.33■□□□□ 0.2
CHKAP35790 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHKAP35790 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.33■□□□□ 0.2
CHKAP35790 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHKAP35790 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.32■□□□□ 0.2
CHKAP35790 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 AC074338.1-201ENST00000416825 156 ntBASIC16.32■□□□□ 0.2
CHKAP35790 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.32■□□□□ 0.2
CHKAP35790 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 AC127383.1-201ENST00000444697 1800 ntBASIC16.32■□□□□ 0.2
CHKAP35790 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 RN7SL399P-201ENST00000471648 279 ntBASIC16.32■□□□□ 0.2
CHKAP35790 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 SLED1-202ENST00000512051 380 ntBASIC16.32■□□□□ 0.2
CHKAP35790 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CHKAP35790 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.32■□□□□ 0.2
CHKAP35790 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 TMEM261P1-201ENST00000604899 340 ntBASIC16.32■□□□□ 0.2
CHKAP35790 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHKAP35790 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHKAP35790 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHKAP35790 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.32■□□□□ 0.2
CHKAP35790 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHKAP35790 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHKAP35790 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CHKAP35790 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.31■□□□□ 0.2
CHKAP35790 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.31■□□□□ 0.2
CHKAP35790 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.31■□□□□ 0.2
CHKAP35790 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CHKAP35790 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKAP35790 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
CHKAP35790 NORAD-201ENST00000565493 5339 ntBASIC16.31■□□□□ 0.2
CHKAP35790 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
CHKAP35790 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHKAP35790 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHKAP35790 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms