Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.23■□□□□ 0.99
CPS1P31327 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPS1P31327 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPS1P31327 BRI3P1-201ENST00000440440 378 ntBASIC21.23■□□□□ 0.99
CPS1P31327 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC21.23■□□□□ 0.99
CPS1P31327 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPS1P31327 AC093752.3-201ENST00000567343 901 ntBASIC21.23■□□□□ 0.99
CPS1P31327 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CPS1P31327 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CPS1P31327 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPS1P31327 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CPS1P31327 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CPS1P31327 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPS1P31327 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPS1P31327 PCDHA14-201ENST00000506751 2298 ntBASIC21.22■□□□□ 0.99
CPS1P31327 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.22■□□□□ 0.99
CPS1P31327 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.22■□□□□ 0.99
CPS1P31327 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CPS1P31327 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 Z98259.2-201ENST00000641583 609 ntBASIC21.22■□□□□ 0.99
CPS1P31327 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.22■□□□□ 0.99
CPS1P31327 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPS1P31327 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPS1P31327 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPS1P31327 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC21.21■□□□□ 0.99
CPS1P31327 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.21■□□□□ 0.99
CPS1P31327 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.21■□□□□ 0.99
CPS1P31327 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.21■□□□□ 0.99
CPS1P31327 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 AC004837.1-201ENST00000446267 564 ntBASIC21.21■□□□□ 0.99
CPS1P31327 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.21■□□□□ 0.99
CPS1P31327 LINC00634-202ENST00000505157 222 ntBASIC21.21■□□□□ 0.99
CPS1P31327 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.21■□□□□ 0.99
CPS1P31327 AC026471.1-201ENST00000564629 3026 ntBASIC21.21■□□□□ 0.99
CPS1P31327 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.21■□□□□ 0.99
CPS1P31327 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPS1P31327 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.21■□□□□ 0.99
CPS1P31327 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPS1P31327 IL9RP3-201ENST00000442856 1674 ntBASIC21.21■□□□□ 0.99
CPS1P31327 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
CPS1P31327 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.2■□□□□ 0.98
CPS1P31327 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 Z69890.1-201ENST00000382990 339 ntBASIC21.2■□□□□ 0.98
CPS1P31327 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPS1P31327 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC21.2■□□□□ 0.98
CPS1P31327 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CPS1P31327 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.2■□□□□ 0.98
CPS1P31327 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.2■□□□□ 0.98
CPS1P31327 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.2■□□□□ 0.98
CPS1P31327 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CPS1P31327 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPS1P31327 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC21.19■□□□□ 0.98
CPS1P31327 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.19■□□□□ 0.98
CPS1P31327 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.19■□□□□ 0.98
CPS1P31327 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC21.19■□□□□ 0.98
CPS1P31327 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.19■□□□□ 0.98
CPS1P31327 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms