Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD40P25942 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.29□□□□□ -0.28
CD40P25942 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 AC008894.3-201ENST00000624324 3103 ntBASIC13.29□□□□□ -0.28
CD40P25942 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40P25942 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.29□□□□□ -0.28
CD40P25942 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD40P25942 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40P25942 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 AC092850.2-201ENST00000623821 2697 ntBASIC13.28□□□□□ -0.28
CD40P25942 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 ACTBP8-201ENST00000403258 1108 ntBASIC13.28□□□□□ -0.28
CD40P25942 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.28□□□□□ -0.28
CD40P25942 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40P25942 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 FO681548.1-201ENST00000455617 1132 ntBASIC13.28□□□□□ -0.28
CD40P25942 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40P25942 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.28□□□□□ -0.28
CD40P25942 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40P25942 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 KRT90P-201ENST00000549264 1064 ntBASIC13.28□□□□□ -0.28
CD40P25942 AC025279.2-201ENST00000569730 653 ntBASIC13.28□□□□□ -0.28
CD40P25942 SAMD11P1-201ENST00000571429 661 ntBASIC13.28□□□□□ -0.28
CD40P25942 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 AC244669.2-201ENST00000612320 853 ntBASIC13.28□□□□□ -0.28
CD40P25942 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 AC145423.3-201ENST00000615987 467 ntBASIC13.28□□□□□ -0.28
CD40P25942 PRSS30P-206ENST00000641773 873 ntBASIC13.28□□□□□ -0.28
CD40P25942 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 NORAD-201ENST00000565493 5339 ntBASIC13.28□□□□□ -0.28
CD40P25942 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.28□□□□□ -0.28
CD40P25942 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CD40P25942 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40P25942 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40P25942 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CD40P25942 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40P25942 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.27□□□□□ -0.28
CD40P25942 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40P25942 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40P25942 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40P25942 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40P25942 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CD40P25942 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 BNIP3P42-201ENST00000454982 569 ntBASIC13.27□□□□□ -0.29
CD40P25942 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.27□□□□□ -0.29
CD40P25942 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 AC079316.1-201ENST00000548397 411 ntBASIC13.27□□□□□ -0.29
CD40P25942 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms