Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 AL591424.1-201ENST00000442569 1213 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 AC009078.2-202ENST00000463353 338 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SLC25A39P2-201ENST00000537614 270 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 AC084121.4-201ENST00000641598 221 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 AF228730.8-201ENST00000642140 221 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 AC015656.1-201ENST00000624209 3578 ntBASIC13.14□□□□□ -0.31
HIST1H1DP16402 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 UXT-AS1-201ENST00000590504 1525 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC113367.3-201ENST00000508316 1912 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ZNF259P1-201ENST00000407656 1365 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AL353705.2-201ENST00000428243 662 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 AC018529.2-202ENST00000611482 3087 ntBASIC13.13□□□□□ -0.31
HIST1H1DP16402 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1DP16402 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1DP16402 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms