Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.11□□□□□ -0.47
CD28P10747 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.11□□□□□ -0.47
CD28P10747 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.11□□□□□ -0.47
CD28P10747 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.11□□□□□ -0.47
CD28P10747 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.11□□□□□ -0.47
CD28P10747 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 PCDHA3-202ENST00000532566 4594 ntBASIC12.11□□□□□ -0.47
CD28P10747 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 CYP2T1P-202ENST00000641596 2535 ntBASIC12.1□□□□□ -0.47
CD28P10747 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.1□□□□□ -0.47
CD28P10747 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 C2orf27AP3-201ENST00000434123 579 ntBASIC12.1□□□□□ -0.47
CD28P10747 ACTBP11-201ENST00000436287 1126 ntBASIC12.1□□□□□ -0.47
CD28P10747 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 FO681548.1-201ENST00000455617 1132 ntBASIC12.1□□□□□ -0.47
CD28P10747 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.1□□□□□ -0.47
CD28P10747 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 AP000812.2-201ENST00000538934 718 ntBASIC12.1□□□□□ -0.47
CD28P10747 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.1□□□□□ -0.47
CD28P10747 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.1□□□□□ -0.47
CD28P10747 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.1□□□□□ -0.47
CD28P10747 AC015910.1-201ENST00000579400 975 ntBASIC12.1□□□□□ -0.47
CD28P10747 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.1□□□□□ -0.47
CD28P10747 AL354718.3-201ENST00000616414 581 ntBASIC12.1□□□□□ -0.47
CD28P10747 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.1□□□□□ -0.47
CD28P10747 CR382287.1-201ENST00000623954 586 ntBASIC12.1□□□□□ -0.47
CD28P10747 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.1□□□□□ -0.47
CD28P10747 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CD28P10747 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 AL391005.1-201ENST00000623953 2435 ntBASIC12.1□□□□□ -0.47
CD28P10747 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CD28P10747 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.1□□□□□ -0.47
CD28P10747 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD28P10747 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 AP003680.1-201ENST00000598970 3660 ntBASIC12.09□□□□□ -0.47
CD28P10747 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms