Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 AL133267.1-201ENST00000398220 340 ntBASIC16.23■□□□□ 0.19
RARAP10276 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.23■□□□□ 0.19
RARAP10276 AC241585.1-201ENST00000433527 519 ntBASIC16.23■□□□□ 0.19
RARAP10276 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 IGHV3-42-201ENST00000520410 361 ntBASIC16.23■□□□□ 0.19
RARAP10276 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.23■□□□□ 0.19
RARAP10276 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 WASH3P-207ENST00000560956 1394 ntBASIC16.23■□□□□ 0.19
RARAP10276 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 AC067930.6-201ENST00000623257 4947 ntBASIC16.23■□□□□ 0.19
RARAP10276 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RARAP10276 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.23■□□□□ 0.19
RARAP10276 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.23■□□□□ 0.19
RARAP10276 AC005912.2-201ENST00000619492 2400 ntBASIC16.23■□□□□ 0.19
RARAP10276 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RARAP10276 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RARAP10276 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 ACE3P-201ENST00000423435 1973 ntBASIC16.22■□□□□ 0.19
RARAP10276 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 AC063926.3-201ENST00000624734 5658 ntBASIC16.22■□□□□ 0.19
RARAP10276 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RARAP10276 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.22■□□□□ 0.19
RARAP10276 AC055876.3-201ENST00000431496 288 ntBASIC16.22■□□□□ 0.19
RARAP10276 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 AC009477.1-201ENST00000452936 217 ntBASIC16.22■□□□□ 0.19
RARAP10276 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.22■□□□□ 0.19
RARAP10276 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.22■□□□□ 0.19
RARAP10276 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.22■□□□□ 0.19
RARAP10276 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
RARAP10276 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RARAP10276 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RARAP10276 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms