Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL365203.3-201ENST00000609742 2057 ntBASIC15.02□□□□□ -0.01
TNFP01375 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TNFP01375 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFP01375 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.02□□□□□ -0.01
TNFP01375 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFP01375 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFP01375 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 PFN1P12-201ENST00000455938 534 ntBASIC15.01□□□□□ -0.01
TNFP01375 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFP01375 AC022616.1-201ENST00000518688 554 ntBASIC15.01□□□□□ -0.01
TNFP01375 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TNFP01375 RN7SL560P-201ENST00000577943 264 ntBASIC15.01□□□□□ -0.01
TNFP01375 MIR4538-201ENST00000581377 78 ntBASIC15.01□□□□□ -0.01
TNFP01375 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFP01375 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFP01375 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFP01375 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFP01375 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
TNFP01375 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TNFP01375 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TNFP01375 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15□□□□□ -0.01
TNFP01375 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 AC099398.1-201ENST00000567919 2776 ntBASIC15□□□□□ -0.01
TNFP01375 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TNFP01375 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15□□□□□ -0.01
TNFP01375 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15□□□□□ -0.01
TNFP01375 AL590640.2-201ENST00000457038 527 ntBASIC15□□□□□ -0.01
TNFP01375 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15□□□□□ -0.01
TNFP01375 AC009542.2-202ENST00000619004 1067 ntBASIC15□□□□□ -0.01
TNFP01375 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TNFP01375 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFP01375 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TNFP01375 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15□□□□□ -0.01
TNFP01375 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TNFP01375 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFP01375 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TNFP01375 AL139384.1-201ENST00000612143 3047 ntBASIC14.99□□□□□ -0.01
TNFP01375 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 AC009090.5-201ENST00000624886 2285 ntBASIC14.99□□□□□ -0.01
TNFP01375 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 AL354989.2-201ENST00000435838 1540 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms