Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLSTN1O94985 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 CICP13-201ENST00000422015 2789 ntBASIC17.21■□□□□ 0.35
CLSTN1O94985 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLSTN1O94985 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.21■□□□□ 0.35
CLSTN1O94985 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 LINC02228-204ENST00000642115 2962 ntBASIC17.21■□□□□ 0.35
CLSTN1O94985 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.21■□□□□ 0.35
CLSTN1O94985 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.21■□□□□ 0.35
CLSTN1O94985 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLSTN1O94985 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CLSTN1O94985 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLSTN1O94985 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLSTN1O94985 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLSTN1O94985 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.2■□□□□ 0.34
CLSTN1O94985 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.2■□□□□ 0.34
CLSTN1O94985 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 RPL37AP1-201ENST00000412502 279 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 BASP1P1-201ENST00000430708 665 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.2■□□□□ 0.34
CLSTN1O94985 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.2■□□□□ 0.34
CLSTN1O94985 AL450472.2-201ENST00000603663 1156 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 AL158211.3-201ENST00000607385 239 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 AL133215.2-201ENST00000609242 977 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 MIR6069-201ENST00000620069 79 ntBASIC17.2■□□□□ 0.34
CLSTN1O94985 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLSTN1O94985 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.2■□□□□ 0.34
CLSTN1O94985 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
CLSTN1O94985 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLSTN1O94985 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.2■□□□□ 0.34
CLSTN1O94985 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.2■□□□□ 0.34
CLSTN1O94985 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.19■□□□□ 0.34
CLSTN1O94985 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.19■□□□□ 0.34
CLSTN1O94985 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 AZGP1P1-201ENST00000411909 902 ntBASIC17.19■□□□□ 0.34
CLSTN1O94985 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 AC097493.3-201ENST00000509725 367 ntBASIC17.19■□□□□ 0.34
CLSTN1O94985 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms