Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RFPL1O75677 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RFPL1O75677 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.53■□□□□ 0.08
RFPL1O75677 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 SPDYE17-201ENST00000412399 783 ntBASIC15.53■□□□□ 0.08
RFPL1O75677 GHSR-202ENST00000427970 912 ntBASIC15.53■□□□□ 0.08
RFPL1O75677 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.53■□□□□ 0.08
RFPL1O75677 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.53■□□□□ 0.08
RFPL1O75677 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.53■□□□□ 0.08
RFPL1O75677 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.53■□□□□ 0.08
RFPL1O75677 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
RFPL1O75677 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.53■□□□□ 0.08
RFPL1O75677 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RFPL1O75677 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFPL1O75677 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.52■□□□□ 0.08
RFPL1O75677 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.52■□□□□ 0.08
RFPL1O75677 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.52■□□□□ 0.08
RFPL1O75677 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.52■□□□□ 0.08
RFPL1O75677 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFPL1O75677 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.52■□□□□ 0.08
RFPL1O75677 FO393414.2-201ENST00000405153 598 ntBASIC15.52■□□□□ 0.08
RFPL1O75677 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RFPL1O75677 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.52■□□□□ 0.08
RFPL1O75677 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.52■□□□□ 0.08
RFPL1O75677 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 TARDBPP1-201ENST00000442013 1203 ntBASIC15.52■□□□□ 0.08
RFPL1O75677 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.52■□□□□ 0.08
RFPL1O75677 AC105021.1-202ENST00000570572 669 ntBASIC15.52■□□□□ 0.08
RFPL1O75677 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RFPL1O75677 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFPL1O75677 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
RFPL1O75677 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.52■□□□□ 0.07
RFPL1O75677 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFPL1O75677 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.52■□□□□ 0.07
RFPL1O75677 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.51■□□□□ 0.07
RFPL1O75677 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RFPL1O75677 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RFPL1O75677 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms