Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH4O75427 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH4O75427 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH4O75427 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH4O75427 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH4O75427 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 INGX-202ENST00000489074 768 ntBASIC16.04■□□□□ 0.16
LRCH4O75427 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 AC026410.3-201ENST00000514280 936 ntBASIC16.04■□□□□ 0.16
LRCH4O75427 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.04■□□□□ 0.16
LRCH4O75427 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH4O75427 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRCH4O75427 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH4O75427 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 MIR770-201ENST00000390219 98 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LRCH4O75427 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 SPTLC1P1-201ENST00000447199 261 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.03■□□□□ 0.16
LRCH4O75427 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.03■□□□□ 0.16
LRCH4O75427 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.03■□□□□ 0.16
LRCH4O75427 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.03■□□□□ 0.16
LRCH4O75427 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 RRP7BP-205ENST00000566851 833 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.03■□□□□ 0.16
LRCH4O75427 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LRCH4O75427 AL049840.4-201ENST00000602422 811 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 AC107373.2-201ENST00000607735 490 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 AC099063.4-201ENST00000641099 1602 ntBASIC16.03■□□□□ 0.16
LRCH4O75427 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms