Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ITM2AO43736 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ITM2AO43736 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ITM2AO43736 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ITM2AO43736 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ITM2AO43736 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ZNF259P1-201ENST00000407656 1365 ntBASIC15.17■□□□□ 0.02
ITM2AO43736 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.17■□□□□ 0.02
ITM2AO43736 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.17■□□□□ 0.02
ITM2AO43736 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.17■□□□□ 0.02
ITM2AO43736 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 AC027601.4-201ENST00000611259 610 ntBASIC15.17■□□□□ 0.02
ITM2AO43736 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ITM2AO43736 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.17■□□□□ 0.02
ITM2AO43736 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITM2AO43736 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.16■□□□□ 0.02
ITM2AO43736 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ITM2AO43736 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ITM2AO43736 FO393414.2-201ENST00000405153 598 ntBASIC15.16■□□□□ 0.02
ITM2AO43736 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ITM2AO43736 SPDYE17-201ENST00000412399 783 ntBASIC15.16■□□□□ 0.02
ITM2AO43736 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.16■□□□□ 0.02
ITM2AO43736 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.16■□□□□ 0.02
ITM2AO43736 AL591424.1-201ENST00000442569 1213 ntBASIC15.16■□□□□ 0.02
ITM2AO43736 AL592309.1-201ENST00000443127 649 ntBASIC15.16■□□□□ 0.02
ITM2AO43736 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 KRT126P-201ENST00000549467 1181 ntBASIC15.16■□□□□ 0.02
ITM2AO43736 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITM2AO43736 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ITM2AO43736 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.16■□□□□ 0.02
ITM2AO43736 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.16■□□□□ 0.02
ITM2AO43736 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.16■□□□□ 0.02
ITM2AO43736 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.16■□□□□ 0.02
ITM2AO43736 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms