Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHMP2AO43633 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP2AO43633 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP2AO43633 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 HILS1-202ENST00000545329 423 ntBASIC17.34■□□□□ 0.37
CHMP2AO43633 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CHMP2AO43633 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP2AO43633 AC015936.2-201ENST00000593177 259 ntBASIC17.34■□□□□ 0.37
CHMP2AO43633 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP2AO43633 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP2AO43633 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHMP2AO43633 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP2AO43633 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP2AO43633 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP2AO43633 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMP2AO43633 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP2AO43633 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CHMP2AO43633 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CHMP2AO43633 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP2AO43633 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.33■□□□□ 0.37
CHMP2AO43633 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHMP2AO43633 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP2AO43633 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP2AO43633 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 ACTG1P3-201ENST00000431775 1114 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP2AO43633 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP2AO43633 AC093433.1-201ENST00000458048 571 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP2AO43633 USP32P1-208ENST00000506594 1164 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 AC068587.3-201ENST00000526613 355 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 PTP4A1P2-201ENST00000546033 454 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP2AO43633 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP2AO43633 AP001063.1-201ENST00000568332 529 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.33■□□□□ 0.36
CHMP2AO43633 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP2AO43633 AC073347.1-201ENST00000421633 2643 ntBASIC17.33■□□□□ 0.36
CHMP2AO43633 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHMP2AO43633 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP2AO43633 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP2AO43633 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP2AO43633 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP2AO43633 AL359258.3-201ENST00000622910 2331 ntBASIC17.32■□□□□ 0.36
CHMP2AO43633 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP2AO43633 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP2AO43633 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP2AO43633 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms