Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 AC010327.5-201ENST00000586923 3061 ntBASIC14.78□□□□□ -0.04
CLOCKO15516 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ELL2P1-201ENST00000413990 1906 ntBASIC14.78□□□□□ -0.04
CLOCKO15516 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CLOCKO15516 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.77□□□□□ -0.04
CLOCKO15516 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.77□□□□□ -0.04
CLOCKO15516 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CLOCKO15516 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CLOCKO15516 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLOCKO15516 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CLOCKO15516 KRT18P28-201ENST00000453838 1332 ntBASIC14.77□□□□□ -0.04
CLOCKO15516 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.77□□□□□ -0.04
CLOCKO15516 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLOCKO15516 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.77□□□□□ -0.05
CLOCKO15516 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.77□□□□□ -0.05
CLOCKO15516 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.77□□□□□ -0.05
CLOCKO15516 CNN2P11-201ENST00000429351 262 ntBASIC14.77□□□□□ -0.05
CLOCKO15516 METTL21AP1-201ENST00000438852 635 ntBASIC14.77□□□□□ -0.05
CLOCKO15516 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.77□□□□□ -0.05
CLOCKO15516 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.77□□□□□ -0.05
CLOCKO15516 AC243562.2-201ENST00000561247 970 ntBASIC14.77□□□□□ -0.05
CLOCKO15516 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.77□□□□□ -0.05
CLOCKO15516 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CLOCKO15516 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CLOCKO15516 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 INTS4P1-203ENST00000641008 3683 ntBASIC14.77□□□□□ -0.05
CLOCKO15516 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.77□□□□□ -0.05
CLOCKO15516 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CLOCKO15516 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CLOCKO15516 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CLOCKO15516 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLOCKO15516 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 REXO1L1P-202ENST00000608646 1974 ntBASIC14.76□□□□□ -0.05
CLOCKO15516 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLOCKO15516 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLOCKO15516 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLOCKO15516 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLOCKO15516 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLOCKO15516 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLOCKO15516 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.76□□□□□ -0.05
CLOCKO15516 AC254562.1-201ENST00000417586 456 ntBASIC14.76□□□□□ -0.05
CLOCKO15516 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms