Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
HDAC3O15379 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.07■□□□□ 0
HDAC3O15379 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HDAC3O15379 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.07■□□□□ 0
HDAC3O15379 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 ZNF259P1-201ENST00000407656 1365 ntBASIC15.07■□□□□ 0
HDAC3O15379 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HDAC3O15379 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.07■□□□□ 0
HDAC3O15379 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 AC018442.1-201ENST00000421439 2061 ntBASIC15.07■□□□□ 0
HDAC3O15379 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.07■□□□□ 0
HDAC3O15379 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.07■□□□□ 0
HDAC3O15379 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.07■□□□□ 0
HDAC3O15379 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HDAC3O15379 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.07■□□□□ 0
HDAC3O15379 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.07■□□□□ 0
HDAC3O15379 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.06■□□□□ 0
HDAC3O15379 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.06■□□□□ 0
HDAC3O15379 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 SPDYE17-201ENST00000412399 783 ntBASIC15.06■□□□□ 0
HDAC3O15379 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 AL353705.2-201ENST00000428243 662 ntBASIC15.06■□□□□ 0
HDAC3O15379 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 KRT18P3-201ENST00000451602 1288 ntBASIC15.06■□□□□ 0
HDAC3O15379 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.06■□□□□ 0
HDAC3O15379 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.06■□□□□ 0
HDAC3O15379 AC105021.1-202ENST00000570572 669 ntBASIC15.06■□□□□ 0
HDAC3O15379 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.06■□□□□ 0
HDAC3O15379 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 AC136759.1-202ENST00000530858 2194 ntBASIC15.06■□□□□ 0
HDAC3O15379 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
HDAC3O15379 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 SBF1P1-201ENST00000444527 5631 ntBASIC15.06■□□□□ 0
HDAC3O15379 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.06■□□□□ 0
HDAC3O15379 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDAC3O15379 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HDAC3O15379 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.05■□□□□ 0
HDAC3O15379 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.05■□□□□ 0
HDAC3O15379 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
HDAC3O15379 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
HDAC3O15379 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDAC3O15379 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.05■□□□□ -0
HDAC3O15379 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDAC3O15379 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HDAC3O15379 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDAC3O15379 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDAC3O15379 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.05■□□□□ -0
HDAC3O15379 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.05■□□□□ -0
HDAC3O15379 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.05■□□□□ -0
HDAC3O15379 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.05■□□□□ -0
HDAC3O15379 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms