Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC079776.4-201ENST00000511039 504 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AP002472.1-201ENST00000577490 586 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC027307.2-201ENST00000591252 911 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC064836.3-201ENST00000607928 673 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 Z83851.2-201ENST00000609564 659 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC079781.5-202ENST00000641784 3743 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AC138969.2-201ENST00000532739 9932 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 FAM220BP-201ENST00000377689 816 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 AC093909.1-201ENST00000504731 1122 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 AC112191.1-201ENST00000523689 701 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 AL691432.3-201ENST00000621860 400 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.25□□□□□ -0.29
TMEM235A6NFC5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM235A6NFC5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms