Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC092552.1-201ENST00000547243 906 ntBASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 SAMD11P1-201ENST00000571429 661 ntBASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 MIR8072-201ENST00000614241 80 ntBASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 INTS4P2-202ENST00000614726 2019 ntBASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC196A0A1B0GTZ2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC196A0A1B0GTZ2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 MYCLP2-201ENST00000449268 967 ntBASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 CHCHD2P3-201ENST00000603038 451 ntBASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC107373.2-201ENST00000607735 490 ntBASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC196A0A1B0GTZ2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 AL138799.1-201ENST00000448213 1675 ntBASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC196A0A1B0GTZ2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms