Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 PCDHB19P-201ENST00000570871 2371 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 RPL18AP3-201ENST00000462885 528 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC131206.1-201ENST00000538078 1211 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC133540.1-201ENST00000620845 1019 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC020916.1-201ENST00000587762 1774 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 AL139384.1-201ENST00000612143 3047 ntBASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 RPS9P1-201ENST00000419943 583 ntBASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 RBM8B-201ENST00000555532 525 ntBASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 ZBED1P1-201ENST00000502364 1930 ntBASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 LILRP1-201ENST00000444199 1370 ntBASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPBQ9Y5S2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 AP000358.1-201ENST00000456260 156 ntBASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 BX088702.1-201ENST00000610784 235 ntBASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 FAM90A2P-201ENST00000511144 1395 ntBASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 FAM90A25P-201ENST00000528404 1395 ntBASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPBQ9Y5S2 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AP000356.3-201ENST00000382243 753 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 MIR557-201ENST00000385239 98 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AL512430.1-201ENST00000392575 860 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AC144522.1-201ENST00000625111 1658 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 XBP1P1-201ENST00000436573 652 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 MIR4522-201ENST00000584932 87 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 AC092299.1-201ENST00000632679 757 ntBASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CDC42BPBQ9Y5S2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms