Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AL355864.2-201ENST00000447420 863 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AP001889.1-201ENST00000525414 633 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AC009486.1-201ENST00000569860 813 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 REXO1L1P-202ENST00000608646 1974 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 AC134915.1-201ENST00000426461 574 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 BCRP2-202ENST00000447763 634 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 BCRP6-201ENST00000510112 632 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 BCRP7-201ENST00000511549 544 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 AC243562.2-201ENST00000561247 970 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 AL359711.2-201ENST00000563105 872 ntBASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN3Q9UPQ7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PDZRN3Q9UPQ7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.89■□□□□ 0.78
PDZRN3Q9UPQ7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 TOMM22P5-201ENST00000416399 439 ntBASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 SOCS2P1-201ENST00000417727 557 ntBASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 YBX1P6-201ENST00000442962 1002 ntBASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.89■□□□□ 0.77
PDZRN3Q9UPQ7 AC091951.1-201ENST00000512854 2465 ntBASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms