Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AL592309.1-201ENST00000443127 649 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 RN7SL589P-201ENST00000481268 310 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 PRYP6-201ENST00000514804 343 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 FAM86C2P-203ENST00000528684 1004 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AC027307.2-201ENST00000591252 911 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AC006538.3-201ENST00000612495 578 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX4Q9UBX2 AC006449.6-201ENST00000612330 2296 ntBASIC13.71□□□□□ -0.21
DUX4Q9UBX2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 PRAL-201ENST00000624952 3286 ntBASIC13.71□□□□□ -0.22
DUX4Q9UBX2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX4Q9UBX2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC005622.1-201ENST00000636801 1703 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 REXO1L8P-201ENST00000604378 1897 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AP006288.1-201ENST00000446065 395 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 LINC01225-203ENST00000563550 1244 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC027612.4-201ENST00000605371 583 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SSR4P1-203ENST00000599569 2260 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AC232323.1-201ENST00000540724 2099 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 REXO1L5P-201ENST00000622260 2098 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 LINC01144-201ENST00000626198 1710 ntBASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms