Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC091812.2-201ENST00000619081 385 ntBASIC17.29■□□□□ 0.36
CBX8Q9HC52 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.29■□□□□ 0.36
CBX8Q9HC52 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 SLC25A6P4-201ENST00000586535 553 ntBASIC17.28■□□□□ 0.36
CBX8Q9HC52 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 AC015802.1-201ENST00000588104 1449 ntBASIC17.28■□□□□ 0.36
CBX8Q9HC52 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CBX8Q9HC52 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX8Q9HC52 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 TARDBPP1-201ENST00000442013 1203 ntBASIC17.27■□□□□ 0.36
CBX8Q9HC52 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CBX8Q9HC52 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX8Q9HC52 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 FLJ16779-201ENST00000612722 7638 ntBASIC17.27■□□□□ 0.35
CBX8Q9HC52 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.27■□□□□ 0.35
CBX8Q9HC52 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX8Q9HC52 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms