Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 AC004066.1-201ENST00000502488 802 ntBASIC15.45■□□□□ 0.06
MRM3Q9HC36 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 AJ011932.1-201ENST00000621707 465 ntBASIC15.45■□□□□ 0.06
MRM3Q9HC36 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.45■□□□□ 0.06
MRM3Q9HC36 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 AL589987.1-201ENST00000453380 819 ntBASIC15.44■□□□□ 0.06
MRM3Q9HC36 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 RARRES2P5-201ENST00000564013 466 ntBASIC15.44■□□□□ 0.06
MRM3Q9HC36 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 LINC02084-201ENST00000606069 1096 ntBASIC15.44■□□□□ 0.06
MRM3Q9HC36 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 CLK3P2-201ENST00000427566 1453 ntBASIC15.44■□□□□ 0.06
MRM3Q9HC36 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.44■□□□□ 0.06
MRM3Q9HC36 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MRM3Q9HC36 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MRM3Q9HC36 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.43■□□□□ 0.06
MRM3Q9HC36 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms