Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A4Q9HBG4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 AC018665.1-201ENST00000622927 1362 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 RPL5P21-201ENST00000404620 815 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 AC119751.2-201ENST00000504529 210 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 USP32P1-208ENST00000506594 1164 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 SLC25A47P1-201ENST00000531577 414 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 SNX29P1-201ENST00000548357 1007 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 RPSAP52-203ENST00000622976 1023 ntBASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A4Q9HBG4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 ACTG1P3-201ENST00000431775 1114 ntBASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 AC144831.1-201ENST00000573312 2656 ntBASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A4Q9HBG4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 AC020658.6-201ENST00000623564 1870 ntBASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.16■□□□□ 0.34
ATP6V0A4Q9HBG4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms