Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AC011467.4-201ENST00000594891 528 ntBASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AL022342.1-201ENST00000400363 863 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 FAM8A3P-201ENST00000427218 844 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 POLD2P1-201ENST00000511220 997 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 RN7SL828P-201ENST00000607615 303 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AL133215.2-201ENST00000609242 977 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 ST20-AS1-201ENST00000560255 4223 ntBASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J3Q9H1A7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms