Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AC104581.4-201ENST00000623126 3052 ntBASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AC011467.4-201ENST00000594891 528 ntBASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 FGD5P1-202ENST00000614866 2498 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AC067750.1-201ENST00000608826 6545 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AL022342.1-201ENST00000400363 863 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 FAM8A3P-201ENST00000427218 844 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 POLD2P1-201ENST00000511220 997 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 RN7SL828P-201ENST00000607615 303 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AL133215.2-201ENST00000609242 977 ntBASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms