Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AC011840.2-201ENST00000563063 1520 ntBASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AC006335.1-201ENST00000445200 547 ntBASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 DUX4L46-201ENST00000566845 751 ntBASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AL353726.2-201ENST00000623259 884 ntBASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 AL157791.1-201ENST00000553667 1699 ntBASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11YQ9BZA8 E2F3P2-201ENST00000447755 1422 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 INE2-201ENST00000630399 1874 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AP003680.1-201ENST00000598970 3660 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AC010491.1-201ENST00000563101 2797 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AC253536.4-201ENST00000440539 267 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 PUDPP3-201ENST00000445368 636 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AC234782.1-201ENST00000451950 919 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AL160314.3-201ENST00000556041 767 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 AL353770.1-201ENST00000614915 403 ntBASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11YQ9BZA8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 REXO1L4P-201ENST00000605109 1937 ntBASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 FAM58BP-201ENST00000439056 645 ntBASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 AC103988.2-201ENST00000561804 725 ntBASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11YQ9BZA8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.71■□□□□ 0.74
PCDH11YQ9BZA8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms