Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AC011840.2-201ENST00000563063 1520 ntBASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AC006335.1-201ENST00000445200 547 ntBASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 DUX4L46-201ENST00000566845 751 ntBASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AL353726.2-201ENST00000623259 884 ntBASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 AL157791.1-201ENST00000553667 1699 ntBASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH11XQ9BZA7 E2F3P2-201ENST00000447755 1422 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 INE2-201ENST00000630399 1874 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AP003680.1-201ENST00000598970 3660 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AC010491.1-201ENST00000563101 2797 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AC253536.4-201ENST00000440539 267 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 PUDPP3-201ENST00000445368 636 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AC234782.1-201ENST00000451950 919 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AL160314.3-201ENST00000556041 767 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 AL353770.1-201ENST00000614915 403 ntBASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH11XQ9BZA7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 REXO1L4P-201ENST00000605109 1937 ntBASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 FAM58BP-201ENST00000439056 645 ntBASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH11XQ9BZA7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms