Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AL353705.2-201ENST00000428243 662 ntBASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AC040169.1-201ENST00000565382 521 ntBASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 AP000845.1-201ENST00000581677 2131 ntBASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 C20orf181-201ENST00000623918 480 ntBASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HDHD3Q9BSH5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 RPL5P21-201ENST00000404620 815 ntBASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 FAM58DP-201ENST00000428076 619 ntBASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 HTR5BP-201ENST00000430851 1154 ntBASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 AC005237.2-201ENST00000434368 219 ntBASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 ALG1L8P-201ENST00000533887 760 ntBASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.1□□□□□ -0.31
HDHD3Q9BSH5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms