Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 AC112693.3-201ENST00000624819 1983 ntBASIC12.96□□□□□ -0.33
CCL13Q99616 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCL13Q99616 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL13Q99616 RPL5P21-201ENST00000404620 815 ntBASIC12.96□□□□□ -0.33
CCL13Q99616 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL13Q99616 VDAC1P7-201ENST00000462417 847 ntBASIC12.96□□□□□ -0.33
CCL13Q99616 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL13Q99616 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL13Q99616 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL13Q99616 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL13Q99616 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL13Q99616 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL13Q99616 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CCL13Q99616 AL049840.4-201ENST00000602422 811 ntBASIC12.96□□□□□ -0.33
CCL13Q99616 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL13Q99616 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL13Q99616 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CCL13Q99616 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL13Q99616 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CCL13Q99616 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CCL13Q99616 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 LINC00554-201ENST00000564841 3011 ntBASIC12.96□□□□□ -0.34
CCL13Q99616 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL13Q99616 AC013268.4-201ENST00000637413 2228 ntBASIC12.96□□□□□ -0.34
CCL13Q99616 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL13Q99616 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.96□□□□□ -0.34
CCL13Q99616 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 CICP11-201ENST00000434745 2827 ntBASIC12.95□□□□□ -0.34
CCL13Q99616 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL13Q99616 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
CCL13Q99616 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
CCL13Q99616 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.95□□□□□ -0.34
CCL13Q99616 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL13Q99616 TP53TG3HP-202ENST00000569755 579 ntBASIC12.95□□□□□ -0.34
CCL13Q99616 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CCL13Q99616 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.95□□□□□ -0.34
CCL13Q99616 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL13Q99616 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 AC092384.3-202ENST00000564646 2873 ntBASIC12.95□□□□□ -0.34
CCL13Q99616 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms