Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AC078925.2-201ENST00000624013 1973 ntBASIC15.68■□□□□ 0.1
PHOX2BQ99453 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 NOC2LP1-201ENST00000450578 752 ntBASIC15.68■□□□□ 0.1
PHOX2BQ99453 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 RN7SL718P-201ENST00000581254 303 ntBASIC15.68■□□□□ 0.1
PHOX2BQ99453 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AL603756.1-201ENST00000606511 2163 ntBASIC15.68■□□□□ 0.1
PHOX2BQ99453 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AZGP1P1-201ENST00000411909 902 ntBASIC15.67■□□□□ 0.1
PHOX2BQ99453 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AL645939.5-201ENST00000606834 243 ntBASIC15.67■□□□□ 0.1
PHOX2BQ99453 AC025181.2-201ENST00000606994 802 ntBASIC15.67■□□□□ 0.1
PHOX2BQ99453 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 AC132872.4-202ENST00000622924 2756 ntBASIC15.67■□□□□ 0.1
PHOX2BQ99453 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PHOX2BQ99453 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHOX2BQ99453 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 PKD1P5-201ENST00000532415 10291 ntBASIC15.66■□□□□ 0.1
PHOX2BQ99453 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 KRT18P64-201ENST00000434946 1219 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms