Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 AL359258.3-201ENST00000622910 2331 ntBASIC18.28■□□□□ 0.52
NEK1Q96PY6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
NEK1Q96PY6 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.28■□□□□ 0.52
NEK1Q96PY6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEK1Q96PY6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 MEP1AP4-201ENST00000423244 1087 ntBASIC18.27■□□□□ 0.52
NEK1Q96PY6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 SPTLC1P1-201ENST00000447199 261 ntBASIC18.27■□□□□ 0.52
NEK1Q96PY6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.27■□□□□ 0.52
NEK1Q96PY6 AJ011932.1-201ENST00000621707 465 ntBASIC18.27■□□□□ 0.52
NEK1Q96PY6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEK1Q96PY6 REXO1L2P-201ENST00000425429 2069 ntBASIC18.27■□□□□ 0.51
NEK1Q96PY6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
NEK1Q96PY6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.27■□□□□ 0.51
NEK1Q96PY6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.27■□□□□ 0.51
NEK1Q96PY6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.27■□□□□ 0.51
NEK1Q96PY6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEK1Q96PY6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NEK1Q96PY6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC012508.2-201ENST00000567613 1472 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms