Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AC254562.1-201ENST00000417586 456 ntBASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 RARRES2P9-201ENST00000565168 469 ntBASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 AP3S2-216ENST00000617003 1561 ntBASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RTN4IP1Q8WWV3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
RTN4IP1Q8WWV3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
RTN4IP1Q8WWV3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RTN4IP1Q8WWV3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTN4IP1Q8WWV3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms