Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 ELL2P1-201ENST00000413990 1906 ntBASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 GPS2P2-201ENST00000430745 888 ntBASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 MTDHP5-201ENST00000598980 586 ntBASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 AC025181.2-201ENST00000606994 802 ntBASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC44A1Q8WWI5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 C8orf49-201ENST00000525043 1968 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AL627223.1-201ENST00000416693 442 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SPDYE14P-201ENST00000442619 822 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC092865.5-201ENST00000545435 363 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC093520.2-201ENST00000561830 333 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 GPALPP1-207ENST00000611650 899 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC006538.3-201ENST00000612495 578 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AL513210.1-201ENST00000629608 234 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms