Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NOC2LP1-201ENST00000450578 752 ntBASIC18.45■□□□□ 0.54
SNED1Q8TER0 KRT18P66-201ENST00000452970 1269 ntBASIC18.45■□□□□ 0.54
SNED1Q8TER0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.45■□□□□ 0.54
SNED1Q8TER0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.45■□□□□ 0.54
SNED1Q8TER0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.45■□□□□ 0.54
SNED1Q8TER0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNED1Q8TER0 DUX4L46-201ENST00000566845 751 ntBASIC18.45■□□□□ 0.54
SNED1Q8TER0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.45■□□□□ 0.54
SNED1Q8TER0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.45■□□□□ 0.54
SNED1Q8TER0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNED1Q8TER0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNED1Q8TER0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNED1Q8TER0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNED1Q8TER0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 AL513523.2-202ENST00000427283 2040 ntBASIC18.44■□□□□ 0.54
SNED1Q8TER0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 AL157414.3-201ENST00000624276 1954 ntBASIC18.44■□□□□ 0.54
SNED1Q8TER0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 RPL13AP19-201ENST00000434320 584 ntBASIC18.44■□□□□ 0.54
SNED1Q8TER0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNED1Q8TER0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.44■□□□□ 0.54
SNED1Q8TER0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.43■□□□□ 0.54
SNED1Q8TER0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 AC114501.1-201ENST00000445949 172 ntBASIC18.43■□□□□ 0.54
SNED1Q8TER0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 AC100827.2-201ENST00000563214 1194 ntBASIC18.43■□□□□ 0.54
SNED1Q8TER0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.43■□□□□ 0.54
SNED1Q8TER0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 AC009090.5-201ENST00000624886 2285 ntBASIC18.43■□□□□ 0.54
SNED1Q8TER0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNED1Q8TER0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.43■□□□□ 0.54
SNED1Q8TER0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms