Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AC023141.13-201ENST00000604991 943 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AL031008.1-201ENST00000619963 541 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AC116407.3-201ENST00000623905 1129 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AL137784.3-201ENST00000623858 2288 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AC073439.1-201ENST00000624121 1774 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AC140658.5-201ENST00000438532 169 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 RN7SL510P-201ENST00000581311 263 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MIR4321-201ENST00000592276 80 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AL589702.1-201ENST00000641229 1509 ntBASIC15.11■□□□□ 0.01
HIPK4Q8NE63 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.11■□□□□ 0.01
HIPK4Q8NE63 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 BX640514.1-201ENST00000583223 1918 ntBASIC15.1■□□□□ 0.01
HIPK4Q8NE63 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 RNA5SP415-201ENST00000517246 115 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms