Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 AC025048.3-201ENST00000590609 569 ntBASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 TEX28P1-201ENST00000613479 1221 ntBASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 TEX28P2-201ENST00000617764 1221 ntBASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 AC005702.4-201ENST00000618393 416 ntBASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 KRT8P44-201ENST00000441609 1350 ntBASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF439Q8NDP4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC025678.2-201ENST00000562061 970 ntBASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC051619.7-201ENST00000568314 623 ntBASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AL138828.2-201ENST00000615812 383 ntBASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZNF439Q8NDP4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms