Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 WASH3P-207ENST00000560956 1394 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AP006294.1-201ENST00000415407 339 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 BX539320.1-201ENST00000623759 877 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CU634019.7-201ENST00000624153 1185 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 FP236241.2-201ENST00000624906 1185 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AC105233.6-201ENST00000642093 218 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AL158070.2-201ENST00000623713 1621 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 AL360270.3-201ENST00000609118 1348 ntBASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC4Q8N9L1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AL162726.2-201ENST00000438986 1017 ntBASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms