Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC012508.2-201ENST00000567613 1472 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 KRT8P31-201ENST00000504812 1408 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 IGHV3-37-201ENST00000518544 340 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AL109837.1-201ENST00000603272 613 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC242376.2-201ENST00000619355 883 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 NAP1L6-202ENST00000641404 1222 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AP005117.1-202ENST00000581724 1908 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 RNA5SP359-201ENST00000364838 113 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 AC135983.4-201ENST00000564116 1262 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 MIR4750-201ENST00000584564 56 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 AC092850.2-201ENST00000623821 2697 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 AL513523.2-202ENST00000427283 2040 ntBASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL27A1Q8IZC6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CICP12-201ENST00000455801 843 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 SCARNA21-201ENST00000517026 139 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AL805961.1-201ENST00000642026 753 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 LILRP1-201ENST00000444199 1370 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms