Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
APLFQ8IW19 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
APLFQ8IW19 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
APLFQ8IW19 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
APLFQ8IW19 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
APLFQ8IW19 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
APLFQ8IW19 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
APLFQ8IW19 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.06
APLFQ8IW19 AC107918.4-201ENST00000641966 3141 ntBASIC15.46■□□□□ 0.06
APLFQ8IW19 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 PIN1P1-201ENST00000412108 996 ntBASIC15.45■□□□□ 0.06
APLFQ8IW19 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 AC142381.1-201ENST00000426099 345 ntBASIC15.45■□□□□ 0.06
APLFQ8IW19 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.45■□□□□ 0.06
APLFQ8IW19 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
APLFQ8IW19 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.45■□□□□ 0.06
APLFQ8IW19 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.45■□□□□ 0.06
APLFQ8IW19 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 AC027369.6-201ENST00000525520 931 ntBASIC15.45■□□□□ 0.06
APLFQ8IW19 AC073389.1-201ENST00000595595 795 ntBASIC15.45■□□□□ 0.06
APLFQ8IW19 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.45■□□□□ 0.06
APLFQ8IW19 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 AL590560.3-201ENST00000623350 461 ntBASIC15.45■□□□□ 0.06
APLFQ8IW19 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.45■□□□□ 0.06
APLFQ8IW19 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APLFQ8IW19 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
APLFQ8IW19 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.44■□□□□ 0.06
APLFQ8IW19 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 AC100757.3-201ENST00000622361 1406 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 AL359881.3-201ENST00000602640 1721 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 MRPS18AP1-201ENST00000414458 589 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.44■□□□□ 0.06
APLFQ8IW19 SERBP1P5-201ENST00000510079 1181 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 AP005018.1-201ENST00000525475 301 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.44■□□□□ 0.06
APLFQ8IW19 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 RARRES2P9-201ENST00000565168 469 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 AL138918.1-201ENST00000568306 659 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 SPDYE22P-201ENST00000582158 798 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 AC007967.4-201ENST00000614700 386 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.44■□□□□ 0.06
APLFQ8IW19 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms